A new experiment for improving A260/230s further from baseline
Why we tried this
Freshly collected EDTA blood usually cruises through Manta’s Blood DNA cartridges with textbook 260/280 and 260/230 ratios (≈ 1.8–2.0). But every now and then a tougher specimen shows up: samples that sat overnight, hemolysed draws, or tubes that took the scenic route to the lab. Those “seasoned” inputs sometimes carry a little more ethanol into the elution, nudging the 260/230 down. Rather than overhaul the chemistry, we tested a tiny process tweak: parking the beads on the magnet for an extra 30 seconds before elution to let residual wash buffer flash off.
The quick‑and‑dirty experiment
Sample | Protocol | Avg Conc. (ng/µL) | Avg 260/280 | Avg 260/230 | %CV Conc. |
---|---|---|---|---|---|
1085 | Standard | 41.5 | 1.80 | 1.61 | 38.0 % |
1085 | +30 s dry | 75.4 | 1.83 | 2.04 | 8.4 % |
1086 | Standard | 69.5 | 1.88 | 2.10 | 14.1 % |
1086 | +30 s dry | 77.7 | 1.89 | 2.28 | 10.4 % |
Unsealed cartridge controls are excluded from the averages. All the data above is average of a larger sample set.
What we saw
More DNA in the tube. Sample 1085 almost doubled (↗ 82 %). Sample 1086 got a modest 12 % bump.
Cleaner ratios. 260/230 jumped from 1.61 → 2.04 (blood sample 1085) and 2.10 → 2.28 (1086). 260/280 nudged closer to the textbook 1.8‑1.9 range.
Tighter reproducibility. Coefficient of variation on concentration crashed from 38 % to 8 % in the worst case.
So… does a 30‑second coffee break matter?
Apparently, yes. The extra half‑minute lets residual ethanol evaporate before elution, dragging fewer salts into the final pool. We expected nicer 260/230 values, but the jump in yield (especially on the lower‑input sample) was a pleasant surprise.
How we're rolling this out
✅Default in the Blood DNA (i4) protocol — the next Manta protocol release ships with the 30s magnet dry step baked in.
✅Firmware update— any Manta running our latest UI supports dwell‑on‑magnet commands. Earlier boxes will need a quick config push (takes ~2 min over Wi-Fi).
Got data of your own?
If you try the tweak, shoot your NanoDrop numbers to connect@cambrianbioworks.com — we'll fold community data into a living QC sheet.
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